Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snf8Q9CZ28 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.16■□□□□ 0.34
Snf8Q9CZ28 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Snf8Q9CZ28 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Gm12527-201ENSMUST00000117967 564 ntBASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Snf8Q9CZ28 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.14■□□□□ 0.33
Snf8Q9CZ28 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Snf8Q9CZ28 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Gm9731-201ENSMUST00000209480 747 ntBASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Snf8Q9CZ28 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Snf8Q9CZ28 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snf8Q9CZ28 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Snf8Q9CZ28 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snf8Q9CZ28 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snf8Q9CZ28 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snf8Q9CZ28 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.11■□□□□ 0.33
Snf8Q9CZ28 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snf8Q9CZ28 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snf8Q9CZ28 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snf8Q9CZ28 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.11■□□□□ 0.33
Snf8Q9CZ28 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Snf8Q9CZ28 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Snf8Q9CZ28 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms