Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lrrc40Q9CRC8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Lrrc40Q9CRC8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.52■□□□□ 0.24
Lrrc40Q9CRC8 Gm13186-201ENSMUST00000118031 316 ntBASIC16.52■□□□□ 0.24
Lrrc40Q9CRC8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lrrc40Q9CRC8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lrrc40Q9CRC8 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.52■□□□□ 0.24
Lrrc40Q9CRC8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.52■□□□□ 0.24
Lrrc40Q9CRC8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.52■□□□□ 0.24
Lrrc40Q9CRC8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lrrc40Q9CRC8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lrrc40Q9CRC8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lrrc40Q9CRC8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lrrc40Q9CRC8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lrrc40Q9CRC8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Lrrc40Q9CRC8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Lrrc40Q9CRC8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Lrrc40Q9CRC8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lrrc40Q9CRC8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lrrc40Q9CRC8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Gm11539-201ENSMUST00000119837 557 ntBASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Gm30025-201ENSMUST00000218555 728 ntBASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Lrrc40Q9CRC8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Gm16061-201ENSMUST00000122167 857 ntBASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Gm13474-201ENSMUST00000122466 815 ntBASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Gm2274-201ENSMUST00000184539 609 ntBASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lrrc40Q9CRC8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms