Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc43Q9CR29 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc43Q9CR29 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc43Q9CR29 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ccdc43Q9CR29 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc43Q9CR29 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc43Q9CR29 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc43Q9CR29 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc43Q9CR29 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc43Q9CR29 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc43Q9CR29 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc43Q9CR29 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc43Q9CR29 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc43Q9CR29 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc43Q9CR29 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc43Q9CR29 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ccdc43Q9CR29 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ccdc43Q9CR29 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Gm3375-201ENSMUST00000203929 796 ntBASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ccdc43Q9CR29 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc43Q9CR29 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ccdc43Q9CR29 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc43Q9CR29 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc43Q9CR29 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.46■□□□□ 0.55
Ccdc43Q9CR29 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc43Q9CR29 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.46■□□□□ 0.55
Ccdc43Q9CR29 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc43Q9CR29 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc43Q9CR29 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc43Q9CR29 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Ccdc43Q9CR29 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc43Q9CR29 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc43Q9CR29 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc43Q9CR29 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 Gm27463-201ENSMUST00000183569 57 ntBASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 Gm7791-201ENSMUST00000219066 539 ntBASIC18.45■□□□□ 0.54
Ccdc43Q9CR29 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms