Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Gm13036-201ENSMUST00000117799 748 ntBASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cldnd1Q9CQX5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Cldnd1Q9CQX5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cldnd1Q9CQX5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cldnd1Q9CQX5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldnd1Q9CQX5 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldnd1Q9CQX5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.02■□□□□ 0.32
Cldnd1Q9CQX5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cldnd1Q9CQX5 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldnd1Q9CQX5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldnd1Q9CQX5 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.02■□□□□ 0.32
Cldnd1Q9CQX5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.02■□□□□ 0.32
Cldnd1Q9CQX5 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.02■□□□□ 0.32
Cldnd1Q9CQX5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldnd1Q9CQX5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cldnd1Q9CQX5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cldnd1Q9CQX5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cldnd1Q9CQX5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldnd1Q9CQX5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldnd1Q9CQX5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldnd1Q9CQX5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cldnd1Q9CQX5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.02■□□□□ 0.31
Cldnd1Q9CQX5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldnd1Q9CQX5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldnd1Q9CQX5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldnd1Q9CQX5 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cldnd1Q9CQX5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldnd1Q9CQX5 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldnd1Q9CQX5 Gm8097-201ENSMUST00000117903 829 ntBASIC17■□□□□ 0.31
Cldnd1Q9CQX5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17■□□□□ 0.31
Cldnd1Q9CQX5 Gm26308-201ENSMUST00000157768 69 ntBASIC17■□□□□ 0.31
Cldnd1Q9CQX5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldnd1Q9CQX5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldnd1Q9CQX5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cldnd1Q9CQX5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldnd1Q9CQX5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Cldnd1Q9CQX5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldnd1Q9CQX5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cldnd1Q9CQX5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldnd1Q9CQX5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.99■□□□□ 0.31
Cldnd1Q9CQX5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.99■□□□□ 0.31
Cldnd1Q9CQX5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cldnd1Q9CQX5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cldnd1Q9CQX5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cldnd1Q9CQX5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldnd1Q9CQX5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cldnd1Q9CQX5 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.99■□□□□ 0.31
Cldnd1Q9CQX5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cldnd1Q9CQX5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldnd1Q9CQX5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Auts2-212ENSMUST00000178555 309 ntBASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cldnd1Q9CQX5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms