Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TpbpbQ9CQC0 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TpbpbQ9CQC0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Gm4968-201ENSMUST00000071458 858 ntBASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TpbpbQ9CQC0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TpbpbQ9CQC0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TpbpbQ9CQC0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TpbpbQ9CQC0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TpbpbQ9CQC0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TpbpbQ9CQC0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TpbpbQ9CQC0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TpbpbQ9CQC0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TpbpbQ9CQC0 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TpbpbQ9CQC0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TpbpbQ9CQC0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms