Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb1Q9CQ70 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Gm27463-201ENSMUST00000183569 57 ntBASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Gm21814-202ENSMUST00000203277 873 ntBASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb1Q9CQ70 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb1Q9CQ70 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb1Q9CQ70 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
H2afb1Q9CQ70 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
H2afb1Q9CQ70 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.58□□□□□ -0.23
H2afb1Q9CQ70 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
H2afb1Q9CQ70 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
H2afb1Q9CQ70 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
H2afb1Q9CQ70 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
H2afb1Q9CQ70 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms