Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh15Q99PJ1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh15Q99PJ1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh15Q99PJ1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdh15Q99PJ1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdh15Q99PJ1 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.81■□□□□ 0.6
Pcdh15Q99PJ1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh15Q99PJ1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh15Q99PJ1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh15Q99PJ1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh15Q99PJ1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.81■□□□□ 0.6
Pcdh15Q99PJ1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh15Q99PJ1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 Gm36967-201ENSMUST00000193814 266 ntBASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.79■□□□□ 0.6
Pcdh15Q99PJ1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Gm11025-201ENSMUST00000140773 466 ntBASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Gm5312-201ENSMUST00000203728 547 ntBASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh15Q99PJ1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdh15Q99PJ1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh15Q99PJ1 Gm8825-201ENSMUST00000182565 998 ntBASIC18.77■□□□□ 0.6
Pcdh15Q99PJ1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdh15Q99PJ1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh15Q99PJ1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Pcdh15Q99PJ1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdh15Q99PJ1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh15Q99PJ1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh15Q99PJ1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh15Q99PJ1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdh15Q99PJ1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Gm27494-201ENSMUST00000184735 189 ntBASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Mir6404-201ENSMUST00000183699 94 ntBASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh15Q99PJ1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms