Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cdh23Q99PF4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Gm25745-201ENSMUST00000174945 133 ntBASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Gm29707-201ENSMUST00000196325 491 ntBASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdh23Q99PF4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Gm27646-201ENSMUST00000183989 110 ntBASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdh23Q99PF4 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cdh23Q99PF4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cdh23Q99PF4 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Cdh23Q99PF4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh23Q99PF4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh23Q99PF4 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.89■□□□□ 0.29
Cdh23Q99PF4 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.89■□□□□ 0.29
Cdh23Q99PF4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh23Q99PF4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Cdh23Q99PF4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh23Q99PF4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cdh23Q99PF4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh23Q99PF4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh23Q99PF4 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.89■□□□□ 0.29
Cdh23Q99PF4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Cdh23Q99PF4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh23Q99PF4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.89■□□□□ 0.29
Cdh23Q99PF4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdh23Q99PF4 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.88■□□□□ 0.29
Cdh23Q99PF4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.88■□□□□ 0.29
Cdh23Q99PF4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh23Q99PF4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh23Q99PF4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh23Q99PF4 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.88■□□□□ 0.29
Cdh23Q99PF4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh23Q99PF4 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.88■□□□□ 0.29
Cdh23Q99PF4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh23Q99PF4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh23Q99PF4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cdh23Q99PF4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Cdh23Q99PF4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh23Q99PF4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh23Q99PF4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdh23Q99PF4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdh23Q99PF4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms