Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col25a1Q99MQ5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col25a1Q99MQ5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col25a1Q99MQ5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col25a1Q99MQ5 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col25a1Q99MQ5 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.2■□□□□ 0.34
Col25a1Q99MQ5 Gm13616-201ENSMUST00000120600 222 ntBASIC17.2■□□□□ 0.34
Col25a1Q99MQ5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.2■□□□□ 0.34
Col25a1Q99MQ5 Mir3113-201ENSMUST00000175478 76 ntBASIC17.2■□□□□ 0.34
Col25a1Q99MQ5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col25a1Q99MQ5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col25a1Q99MQ5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col25a1Q99MQ5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col25a1Q99MQ5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col25a1Q99MQ5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col25a1Q99MQ5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col25a1Q99MQ5 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Gm25990-201ENSMUST00000102440 86 ntBASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Gm27628-201ENSMUST00000184911 107 ntBASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col25a1Q99MQ5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Gm5626-201ENSMUST00000222151 1058 ntBASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Col25a1Q99MQ5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.16■□□□□ 0.34
Col25a1Q99MQ5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col25a1Q99MQ5 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col25a1Q99MQ5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col25a1Q99MQ5 Gm13312-201ENSMUST00000119631 718 ntBASIC17.16■□□□□ 0.34
Col25a1Q99MQ5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.16■□□□□ 0.34
Col25a1Q99MQ5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.16■□□□□ 0.34
Col25a1Q99MQ5 AV026068-213ENSMUST00000223675 1171 ntBASIC17.16■□□□□ 0.34
Col25a1Q99MQ5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col25a1Q99MQ5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms