Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdk5rap3Q99LM2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdk5rap3Q99LM2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Gm18958-201ENSMUST00000174258 762 ntBASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdk5rap3Q99LM2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Mir1199-201ENSMUST00000117015 119 ntBASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Gm10653-202ENSMUST00000139570 835 ntBASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdk5rap3Q99LM2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Gm20760-201ENSMUST00000179197 648 ntBASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.21■□□□□ 0.35
Cdk5rap3Q99LM2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdk5rap3Q99LM2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
Cdk5rap3Q99LM2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk5rap3Q99LM2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.2■□□□□ 0.34
Cdk5rap3Q99LM2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk5rap3Q99LM2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk5rap3Q99LM2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk5rap3Q99LM2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk5rap3Q99LM2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk5rap3Q99LM2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk5rap3Q99LM2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk5rap3Q99LM2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdk5rap3Q99LM2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms