Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm11643-201ENSMUST00000119578 864 ntBASIC16.8■□□□□ 0.28
Cdk9Q99J95 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Gm26524-201ENSMUST00000192339 390 ntBASIC16.8■□□□□ 0.28
Cdk9Q99J95 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdk9Q99J95 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.79■□□□□ 0.28
Cdk9Q99J95 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Gm11927-201ENSMUST00000118472 759 ntBASIC16.79■□□□□ 0.28
Cdk9Q99J95 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk9Q99J95 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk9Q99J95 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.78■□□□□ 0.28
Cdk9Q99J95 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk9Q99J95 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk9Q99J95 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk9Q99J95 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk9Q99J95 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk9Q99J95 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk9Q99J95 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk9Q99J95 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Cdk9Q99J95 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk9Q99J95 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk9Q99J95 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk9Q99J95 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk9Q99J95 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Cdk9Q99J95 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.77■□□□□ 0.28
Cdk9Q99J95 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.77■□□□□ 0.28
Cdk9Q99J95 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk9Q99J95 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.77■□□□□ 0.28
Cdk9Q99J95 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk9Q99J95 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk9Q99J95 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk9Q99J95 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk9Q99J95 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk9Q99J95 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk9Q99J95 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.77■□□□□ 0.27
Cdk9Q99J95 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk9Q99J95 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Cdk9Q99J95 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.77■□□□□ 0.27
Cdk9Q99J95 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk9Q99J95 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk9Q99J95 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Cdk9Q99J95 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms