Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cacna1dQ99246 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.53■□□□□ 0.24
Cacna1dQ99246 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Gm27867-201ENSMUST00000184778 125 ntBASIC16.53■□□□□ 0.24
Cacna1dQ99246 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cacna1dQ99246 Gm10052-201ENSMUST00000168019 960 ntBASIC16.53■□□□□ 0.24
Cacna1dQ99246 Gm7729-201ENSMUST00000050143 801 ntBASIC16.53■□□□□ 0.24
Cacna1dQ99246 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cacna1dQ99246 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Cacna1dQ99246 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1dQ99246 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.52■□□□□ 0.24
Cacna1dQ99246 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Cacna1dQ99246 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1dQ99246 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1dQ99246 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cacna1dQ99246 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.52■□□□□ 0.24
Cacna1dQ99246 Gm12895-201ENSMUST00000122214 226 ntBASIC16.52■□□□□ 0.24
Cacna1dQ99246 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.52■□□□□ 0.24
Cacna1dQ99246 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.52■□□□□ 0.24
Cacna1dQ99246 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.52■□□□□ 0.24
Cacna1dQ99246 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1dQ99246 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1dQ99246 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1dQ99246 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1dQ99246 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1dQ99246 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Cacna1dQ99246 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Cacna1dQ99246 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.52■□□□□ 0.23
Cacna1dQ99246 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cacna1dQ99246 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.51■□□□□ 0.23
Cacna1dQ99246 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cacna1dQ99246 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1dQ99246 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1dQ99246 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.5■□□□□ 0.23
Cacna1dQ99246 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Gm44430-201ENSMUST00000203376 995 ntBASIC16.5■□□□□ 0.23
Cacna1dQ99246 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.5■□□□□ 0.23
Cacna1dQ99246 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Gm12644-201ENSMUST00000119935 606 ntBASIC16.5■□□□□ 0.23
Cacna1dQ99246 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cacna1dQ99246 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cacna1dQ99246 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1dQ99246 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1dQ99246 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1dQ99246 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1dQ99246 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cacna1dQ99246 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms