Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col20a1Q923P0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.6■□□□□ 0.73
Col20a1Q923P0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col20a1Q923P0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col20a1Q923P0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Col20a1Q923P0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col20a1Q923P0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col20a1Q923P0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col20a1Q923P0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col20a1Q923P0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col20a1Q923P0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col20a1Q923P0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col20a1Q923P0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.6■□□□□ 0.73
Col20a1Q923P0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col20a1Q923P0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col20a1Q923P0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col20a1Q923P0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col20a1Q923P0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col20a1Q923P0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.59■□□□□ 0.73
Col20a1Q923P0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col20a1Q923P0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col20a1Q923P0 Gm27459-201ENSMUST00000184860 107 ntBASIC19.59■□□□□ 0.73
Col20a1Q923P0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col20a1Q923P0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.59■□□□□ 0.73
Col20a1Q923P0 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.59■□□□□ 0.73
Col20a1Q923P0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col20a1Q923P0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col20a1Q923P0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col20a1Q923P0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.59■□□□□ 0.73
Col20a1Q923P0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col20a1Q923P0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col20a1Q923P0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col20a1Q923P0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col20a1Q923P0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col20a1Q923P0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.59■□□□□ 0.73
Col20a1Q923P0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col20a1Q923P0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.58■□□□□ 0.73
Col20a1Q923P0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.58■□□□□ 0.73
Col20a1Q923P0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col20a1Q923P0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col20a1Q923P0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col20a1Q923P0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Col20a1Q923P0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col20a1Q923P0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col20a1Q923P0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col20a1Q923P0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col20a1Q923P0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col20a1Q923P0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col20a1Q923P0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col20a1Q923P0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col20a1Q923P0 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.58■□□□□ 0.72
Col20a1Q923P0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Col20a1Q923P0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col20a1Q923P0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col20a1Q923P0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col20a1Q923P0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col20a1Q923P0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col20a1Q923P0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col20a1Q923P0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col20a1Q923P0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col20a1Q923P0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.57■□□□□ 0.72
Col20a1Q923P0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col20a1Q923P0 Gm7461-201ENSMUST00000058918 827 ntBASIC19.57■□□□□ 0.72
Col20a1Q923P0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Col20a1Q923P0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col20a1Q923P0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col20a1Q923P0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col20a1Q923P0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col20a1Q923P0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col20a1Q923P0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col20a1Q923P0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col20a1Q923P0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Col20a1Q923P0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col20a1Q923P0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col20a1Q923P0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col20a1Q923P0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col20a1Q923P0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col20a1Q923P0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col20a1Q923P0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col20a1Q923P0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Col20a1Q923P0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col20a1Q923P0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col20a1Q923P0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Col20a1Q923P0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col20a1Q923P0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col20a1Q923P0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 113.3 ms