Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha3Q91Y16 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.37■□□□□ 0.37
Pcdha3Q91Y16 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha3Q91Y16 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdha3Q91Y16 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdha3Q91Y16 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.37■□□□□ 0.37
Pcdha3Q91Y16 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pcdha3Q91Y16 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha3Q91Y16 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdha3Q91Y16 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha3Q91Y16 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha3Q91Y16 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha3Q91Y16 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha3Q91Y16 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha3Q91Y16 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha3Q91Y16 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha3Q91Y16 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha3Q91Y16 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha3Q91Y16 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdha3Q91Y16 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha3Q91Y16 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.36■□□□□ 0.37
Pcdha3Q91Y16 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha3Q91Y16 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha3Q91Y16 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha3Q91Y16 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha3Q91Y16 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pcdha3Q91Y16 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pcdha3Q91Y16 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha3Q91Y16 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha3Q91Y16 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha3Q91Y16 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Gm6659-201ENSMUST00000174752 547 ntBASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha3Q91Y16 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Gm21559-201ENSMUST00000220638 855 ntBASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Gm8587-201ENSMUST00000076538 843 ntBASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pcdha3Q91Y16 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Pcdha3Q91Y16 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdha3Q91Y16 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms