Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Mir1668-201ENSMUST00000184114 107 ntBASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Gm45058-201ENSMUST00000205810 766 ntBASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Gm18959-201ENSMUST00000208954 655 ntBASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb1Q91Y08 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb1Q91Y08 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb1Q91Y08 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdhb1Q91Y08 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb1Q91Y08 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb1Q91Y08 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdhb1Q91Y08 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.27■□□□□ 0.36
Pcdhb1Q91Y08 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdhb1Q91Y08 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb1Q91Y08 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb1Q91Y08 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb1Q91Y08 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Pcdhb1Q91Y08 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.27■□□□□ 0.36
Pcdhb1Q91Y08 Gm10566-201ENSMUST00000086739 996 ntBASIC17.27■□□□□ 0.36
Pcdhb1Q91Y08 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb1Q91Y08 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.27■□□□□ 0.35
Pcdhb1Q91Y08 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb1Q91Y08 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.27■□□□□ 0.35
Pcdhb1Q91Y08 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb1Q91Y08 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb1Q91Y08 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb1Q91Y08 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Gm44450-201ENSMUST00000199528 114 ntBASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb1Q91Y08 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdhb1Q91Y08 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdhb1Q91Y08 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms