Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb5Q91XZ5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Pcdhb5Q91XZ5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb5Q91XZ5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pcdhb5Q91XZ5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.58■□□□□ 0.72
Pcdhb5Q91XZ5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb5Q91XZ5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.58■□□□□ 0.72
Pcdhb5Q91XZ5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.58■□□□□ 0.72
Pcdhb5Q91XZ5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb5Q91XZ5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb5Q91XZ5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb5Q91XZ5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb5Q91XZ5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb5Q91XZ5 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb5Q91XZ5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb5Q91XZ5 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb5Q91XZ5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pcdhb5Q91XZ5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb5Q91XZ5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Pcdhb5Q91XZ5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb5Q91XZ5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.57■□□□□ 0.72
Pcdhb5Q91XZ5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb5Q91XZ5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhb5Q91XZ5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb5Q91XZ5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb5Q91XZ5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb5Q91XZ5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb5Q91XZ5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb5Q91XZ5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb5Q91XZ5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb5Q91XZ5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb5Q91XZ5 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb5Q91XZ5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdhb5Q91XZ5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb5Q91XZ5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.56■□□□□ 0.72
Pcdhb5Q91XZ5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Pcdhb5Q91XZ5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb5Q91XZ5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb5Q91XZ5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhb5Q91XZ5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb5Q91XZ5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb5Q91XZ5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb5Q91XZ5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb5Q91XZ5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhb5Q91XZ5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb5Q91XZ5 Gm6376-201ENSMUST00000209407 580 ntBASIC19.55■□□□□ 0.72
Pcdhb5Q91XZ5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.55■□□□□ 0.72
Pcdhb5Q91XZ5 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb5Q91XZ5 Gm6296-201ENSMUST00000222599 943 ntBASIC19.55■□□□□ 0.72
Pcdhb5Q91XZ5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pcdhb5Q91XZ5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb5Q91XZ5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb5Q91XZ5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb5Q91XZ5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhb5Q91XZ5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb5Q91XZ5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb5Q91XZ5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb5Q91XZ5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.54■□□□□ 0.72
Pcdhb5Q91XZ5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.54■□□□□ 0.72
Pcdhb5Q91XZ5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb5Q91XZ5 AW822252-206ENSMUST00000208904 237 ntBASIC19.54■□□□□ 0.72
Pcdhb5Q91XZ5 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.54■□□□□ 0.72
Pcdhb5Q91XZ5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb5Q91XZ5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Pcdhb5Q91XZ5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb5Q91XZ5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb5Q91XZ5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb5Q91XZ5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb5Q91XZ5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhb5Q91XZ5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhb5Q91XZ5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb5Q91XZ5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb5Q91XZ5 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.52■□□□□ 0.72
Pcdhb5Q91XZ5 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.52■□□□□ 0.72
Pcdhb5Q91XZ5 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Pcdhb5Q91XZ5 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.52■□□□□ 0.72
Pcdhb5Q91XZ5 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pcdhb5Q91XZ5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb5Q91XZ5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb5Q91XZ5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhb5Q91XZ5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms