Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga9Q91XX9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.46■□□□□ 0.23
Pcdhga9Q91XX9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga9Q91XX9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhga9Q91XX9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhga9Q91XX9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhga9Q91XX9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Gm27389-201ENSMUST00000183622 195 ntBASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhga9Q91XX9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Gm21559-201ENSMUST00000220638 855 ntBASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Gm8587-201ENSMUST00000076538 843 ntBASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhga9Q91XX9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhga9Q91XX9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Gm18115-201ENSMUST00000221209 621 ntBASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhga9Q91XX9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Phf7-203ENSMUST00000226565 1971 ntBASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Gm26039-201ENSMUST00000158152 144 ntBASIC16.41■□□□□ 0.22
Pcdhga9Q91XX9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms