Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhgc5Q91XW9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Pcdhgc5Q91XW9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhgc5Q91XW9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Pcdhgc5Q91XW9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhgc5Q91XW9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhgc5Q91XW9 Mir8098-201ENSMUST00000184011 137 ntBASIC18.89■□□□□ 0.61
Pcdhgc5Q91XW9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhgc5Q91XW9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Pcdhgc5Q91XW9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Pcdhgc5Q91XW9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Pcdhgc5Q91XW9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhgc5Q91XW9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhgc5Q91XW9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Pcdhgc5Q91XW9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhgc5Q91XW9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Gm11452-201ENSMUST00000122376 690 ntBASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Gm43347-201ENSMUST00000200226 580 ntBASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgc5Q91XW9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc5Q91XW9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc5Q91XW9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhgc5Q91XW9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc5Q91XW9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc5Q91XW9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhgc5Q91XW9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhgc5Q91XW9 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc5Q91XW9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc5Q91XW9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc5Q91XW9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc5Q91XW9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgc5Q91XW9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms