Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ddx41Q91VN6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ddx41Q91VN6 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.05■□□□□ 0.64
Ddx41Q91VN6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx41Q91VN6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx41Q91VN6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx41Q91VN6 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx41Q91VN6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx41Q91VN6 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx41Q91VN6 Gm17808-201ENSMUST00000200859 894 ntBASIC19.05■□□□□ 0.64
Ddx41Q91VN6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.05■□□□□ 0.64
Ddx41Q91VN6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx41Q91VN6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx41Q91VN6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx41Q91VN6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx41Q91VN6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx41Q91VN6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ddx41Q91VN6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ddx41Q91VN6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Gm18958-201ENSMUST00000174258 762 ntBASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ddx41Q91VN6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.02■□□□□ 0.64
Ddx41Q91VN6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.02■□□□□ 0.64
Ddx41Q91VN6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx41Q91VN6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx41Q91VN6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx41Q91VN6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx41Q91VN6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx41Q91VN6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx41Q91VN6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx41Q91VN6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.02■□□□□ 0.64
Ddx41Q91VN6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx41Q91VN6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx41Q91VN6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx41Q91VN6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ddx41Q91VN6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ddx41Q91VN6 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.02■□□□□ 0.63
Ddx41Q91VN6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ddx41Q91VN6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms