Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh18Q8VHR0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 Mir8112-201ENSMUST00000184382 131 ntBASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdh18Q8VHR0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Gm15375-201ENSMUST00000119510 849 ntBASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pcdh18Q8VHR0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Gm11249-201ENSMUST00000117071 859 ntBASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Gm11643-201ENSMUST00000119578 864 ntBASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdh18Q8VHR0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Gm13401-201ENSMUST00000117074 291 ntBASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pcdh18Q8VHR0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms