Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lmcd1Q8VEE1 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 Gm11780-201ENSMUST00000136880 516 ntBASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lmcd1Q8VEE1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Gm12497-201ENSMUST00000138778 237 ntBASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lmcd1Q8VEE1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Gm14701-201ENSMUST00000117156 348 ntBASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lmcd1Q8VEE1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lmcd1Q8VEE1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lmcd1Q8VEE1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lmcd1Q8VEE1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lmcd1Q8VEE1 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.65■□□□□ 0.42
Lmcd1Q8VEE1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lmcd1Q8VEE1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.65■□□□□ 0.42
Lmcd1Q8VEE1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lmcd1Q8VEE1 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.65■□□□□ 0.42
Lmcd1Q8VEE1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lmcd1Q8VEE1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lmcd1Q8VEE1 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.65■□□□□ 0.42
Lmcd1Q8VEE1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lmcd1Q8VEE1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lmcd1Q8VEE1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Lmcd1Q8VEE1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms