Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkd2Q8VE28 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkd2Q8VE28 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Nkd2Q8VE28 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkd2Q8VE28 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkd2Q8VE28 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkd2Q8VE28 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nkd2Q8VE28 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkd2Q8VE28 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkd2Q8VE28 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkd2Q8VE28 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkd2Q8VE28 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkd2Q8VE28 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkd2Q8VE28 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.18■□□□□ 0.02
Nkd2Q8VE28 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkd2Q8VE28 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Nkd2Q8VE28 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkd2Q8VE28 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkd2Q8VE28 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nkd2Q8VE28 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.18■□□□□ 0.02
Nkd2Q8VE28 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkd2Q8VE28 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nkd2Q8VE28 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nkd2Q8VE28 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Gm29791-202ENSMUST00000207888 369 ntBASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nkd2Q8VE28 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nkd2Q8VE28 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd2Q8VE28 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nkd2Q8VE28 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd2Q8VE28 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkd2Q8VE28 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd2Q8VE28 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.14■□□□□ 0.01
Nkd2Q8VE28 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.14■□□□□ 0.01
Nkd2Q8VE28 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd2Q8VE28 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd2Q8VE28 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nkd2Q8VE28 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nkd2Q8VE28 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms