Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx39aQ8VDW0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx39aQ8VDW0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ddx39aQ8VDW0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Ddx39aQ8VDW0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.46■□□□□ 0.54
Ddx39aQ8VDW0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Gm12895-201ENSMUST00000122214 226 ntBASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ddx39aQ8VDW0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx39aQ8VDW0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx39aQ8VDW0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx39aQ8VDW0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ddx39aQ8VDW0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx39aQ8VDW0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx39aQ8VDW0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx39aQ8VDW0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx39aQ8VDW0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ddx39aQ8VDW0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.44■□□□□ 0.54
Ddx39aQ8VDW0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx39aQ8VDW0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx39aQ8VDW0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ddx39aQ8VDW0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx39aQ8VDW0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx39aQ8VDW0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx39aQ8VDW0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms