Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Dnajc28Q8VCE1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Dnajc28Q8VCE1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Dnajc28Q8VCE1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Dnajc28Q8VCE1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Gm24589-201ENSMUST00000116692 94 ntBASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Gm8969-201ENSMUST00000199694 526 ntBASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.12■□□□□ 0.49
Dnajc28Q8VCE1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dnajc28Q8VCE1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dnajc28Q8VCE1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Dnajc28Q8VCE1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dnajc28Q8VCE1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dnajc28Q8VCE1 Olfr129-201ENSMUST00000122318 993 ntBASIC18.11■□□□□ 0.49
Dnajc28Q8VCE1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dnajc28Q8VCE1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Dnajc28Q8VCE1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dnajc28Q8VCE1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dnajc28Q8VCE1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dnajc28Q8VCE1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dnajc28Q8VCE1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dnajc28Q8VCE1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dnajc28Q8VCE1 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Dnajc28Q8VCE1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dnajc28Q8VCE1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dnajc28Q8VCE1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dnajc28Q8VCE1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dnajc28Q8VCE1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dnajc28Q8VCE1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dnajc28Q8VCE1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dnajc28Q8VCE1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Dnajc28Q8VCE1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.1■□□□□ 0.49
Dnajc28Q8VCE1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.1■□□□□ 0.49
Dnajc28Q8VCE1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Dnajc28Q8VCE1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.09■□□□□ 0.49
Dnajc28Q8VCE1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms