Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Ndc1Q8VCB1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ndc1Q8VCB1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ndc1Q8VCB1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ndc1Q8VCB1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ndc1Q8VCB1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ndc1Q8VCB1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Gm17807-201ENSMUST00000186869 298 ntBASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ndc1Q8VCB1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms