Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf8Q8VC56 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.04■□□□□ 0.16
Rnf8Q8VC56 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf8Q8VC56 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Gm37055-201ENSMUST00000191866 133 ntBASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf8Q8VC56 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf8Q8VC56 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf8Q8VC56 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf8Q8VC56 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf8Q8VC56 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf8Q8VC56 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf8Q8VC56 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf8Q8VC56 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.02■□□□□ 0.16
Rnf8Q8VC56 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.02■□□□□ 0.16
Rnf8Q8VC56 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.02■□□□□ 0.16
Rnf8Q8VC56 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf8Q8VC56 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Rnf8Q8VC56 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Rnf8Q8VC56 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf8Q8VC56 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf8Q8VC56 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.02■□□□□ 0.15
Rnf8Q8VC56 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf8Q8VC56 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf8Q8VC56 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf8Q8VC56 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Rnf8Q8VC56 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf8Q8VC56 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf8Q8VC56 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf8Q8VC56 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf8Q8VC56 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf8Q8VC56 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf8Q8VC56 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Rnf8Q8VC56 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf8Q8VC56 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf8Q8VC56 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.01■□□□□ 0.15
Rnf8Q8VC56 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf8Q8VC56 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf8Q8VC56 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rnf8Q8VC56 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.01■□□□□ 0.15
Rnf8Q8VC56 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms