Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Top1mtQ8R4U6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Top1mtQ8R4U6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Top1mtQ8R4U6 Mir1668-201ENSMUST00000184114 107 ntBASIC19.89■□□□□ 0.77
Top1mtQ8R4U6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Top1mtQ8R4U6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Top1mtQ8R4U6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Top1mtQ8R4U6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Top1mtQ8R4U6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Top1mtQ8R4U6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Top1mtQ8R4U6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Top1mtQ8R4U6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Top1mtQ8R4U6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Top1mtQ8R4U6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Top1mtQ8R4U6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Top1mtQ8R4U6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Top1mtQ8R4U6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Top1mtQ8R4U6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Top1mtQ8R4U6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Top1mtQ8R4U6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.87■□□□□ 0.77
Top1mtQ8R4U6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.87■□□□□ 0.77
Top1mtQ8R4U6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.87■□□□□ 0.77
Top1mtQ8R4U6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Top1mtQ8R4U6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Top1mtQ8R4U6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Top1mtQ8R4U6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Top1mtQ8R4U6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.86■□□□□ 0.77
Top1mtQ8R4U6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Top1mtQ8R4U6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Top1mtQ8R4U6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Top1mtQ8R4U6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Top1mtQ8R4U6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Top1mtQ8R4U6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Top1mtQ8R4U6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Top1mtQ8R4U6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Top1mtQ8R4U6 Gm44450-201ENSMUST00000199528 114 ntBASIC19.86■□□□□ 0.77
Top1mtQ8R4U6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Top1mtQ8R4U6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Top1mtQ8R4U6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Top1mtQ8R4U6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.86■□□□□ 0.77
Top1mtQ8R4U6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Top1mtQ8R4U6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.85■□□□□ 0.77
Top1mtQ8R4U6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms