Protein–RNA interactions for Protein: Q8R4I1

Atxn7, Ataxin-7, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn7Q8R4I1 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atxn7Q8R4I1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.2■□□□□ 0.66
Atxn7Q8R4I1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atxn7Q8R4I1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.2■□□□□ 0.66
Atxn7Q8R4I1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atxn7Q8R4I1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atxn7Q8R4I1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Atxn7Q8R4I1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atxn7Q8R4I1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atxn7Q8R4I1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Rarb-207ENSMUST00000225921 2756 ntBASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Mir5131-201ENSMUST00000175426 93 ntBASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Gm18206-201ENSMUST00000207027 926 ntBASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atxn7Q8R4I1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Gm5867-201ENSMUST00000063197 592 ntBASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atxn7Q8R4I1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atxn7Q8R4I1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 Gm25745-201ENSMUST00000174945 133 ntBASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atxn7Q8R4I1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atxn7Q8R4I1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atxn7Q8R4I1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atxn7Q8R4I1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atxn7Q8R4I1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atxn7Q8R4I1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atxn7Q8R4I1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atxn7Q8R4I1 Gm7506-201ENSMUST00000207758 815 ntBASIC19.15■□□□□ 0.66
Atxn7Q8R4I1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Atxn7Q8R4I1 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms