Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chmp7Q8R1T1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Chmp7Q8R1T1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Chmp7Q8R1T1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chmp7Q8R1T1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Chmp7Q8R1T1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp7Q8R1T1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp7Q8R1T1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp7Q8R1T1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp7Q8R1T1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.24■□□□□ 0.99
Chmp7Q8R1T1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp7Q8R1T1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC21.24■□□□□ 0.99
Chmp7Q8R1T1 Gm13830-205ENSMUST00000201195 1155 ntBASIC21.24■□□□□ 0.99
Chmp7Q8R1T1 Gm6296-201ENSMUST00000222599 943 ntBASIC21.24■□□□□ 0.99
Chmp7Q8R1T1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC21.24■□□□□ 0.99
Chmp7Q8R1T1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp7Q8R1T1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp7Q8R1T1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.24■□□□□ 0.99
Chmp7Q8R1T1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Chmp7Q8R1T1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Gm2651-201ENSMUST00000203560 838 ntBASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Shroom3-211ENSMUST00000225438 5742 ntBASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Gm37519-201ENSMUST00000191687 2210 ntBASIC21.23■□□□□ 0.99
Chmp7Q8R1T1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Gm44357-201ENSMUST00000195897 142 ntBASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Gm19658-201ENSMUST00000196231 138 ntBASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Gm44367-201ENSMUST00000196836 138 ntBASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Gm44350-201ENSMUST00000197197 138 ntBASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Gm44390-201ENSMUST00000197533 144 ntBASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Gm44313-201ENSMUST00000198018 138 ntBASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Gm44486-201ENSMUST00000198508 138 ntBASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Gm44314-201ENSMUST00000199263 138 ntBASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Gm44394-201ENSMUST00000199558 138 ntBASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Gm44484-201ENSMUST00000199873 138 ntBASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Gm44466-201ENSMUST00000200264 138 ntBASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Gm44359-201ENSMUST00000200671 138 ntBASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp7Q8R1T1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Gm7862-201ENSMUST00000121461 292 ntBASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp7Q8R1T1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.2■□□□□ 0.99
Chmp7Q8R1T1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.99
Chmp7Q8R1T1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp7Q8R1T1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp7Q8R1T1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp7Q8R1T1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC21.2■□□□□ 0.98
Chmp7Q8R1T1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp7Q8R1T1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC21.2■□□□□ 0.98
Chmp7Q8R1T1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp7Q8R1T1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp7Q8R1T1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp7Q8R1T1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp7Q8R1T1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Chmp7Q8R1T1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp7Q8R1T1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp7Q8R1T1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms