Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nudcd3Q8R1N4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Gm18025-201ENSMUST00000221733 862 ntBASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nudcd3Q8R1N4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Gm11249-201ENSMUST00000117071 859 ntBASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Gm42545-201ENSMUST00000202755 922 ntBASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nudcd3Q8R1N4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Gm12896-201ENSMUST00000118430 226 ntBASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nudcd3Q8R1N4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms