Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp40Q8R1F9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp40Q8R1F9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp40Q8R1F9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp40Q8R1F9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp40Q8R1F9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rpp40Q8R1F9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rpp40Q8R1F9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 Gm10819-201ENSMUST00000099988 561 ntBASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rpp40Q8R1F9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp40Q8R1F9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp40Q8R1F9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp40Q8R1F9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rpp40Q8R1F9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp40Q8R1F9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp40Q8R1F9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp40Q8R1F9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp40Q8R1F9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp40Q8R1F9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp40Q8R1F9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp40Q8R1F9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp40Q8R1F9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp40Q8R1F9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rpp40Q8R1F9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rpp40Q8R1F9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Gm15794-201ENSMUST00000120182 631 ntBASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Gm27742-201ENSMUST00000184667 60 ntBASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Ank2-226ENSMUST00000189368 339 ntBASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rpp40Q8R1F9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rpp40Q8R1F9 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms