Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx54Q8K4L0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx54Q8K4L0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx54Q8K4L0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx54Q8K4L0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx54Q8K4L0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Ddx54Q8K4L0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ddx54Q8K4L0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx54Q8K4L0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx54Q8K4L0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx54Q8K4L0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx54Q8K4L0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx54Q8K4L0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC21.74■■□□□ 1.07
Ddx54Q8K4L0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC21.74■■□□□ 1.07
Ddx54Q8K4L0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ddx54Q8K4L0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC21.74■■□□□ 1.07
Ddx54Q8K4L0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx54Q8K4L0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC21.74■■□□□ 1.07
Ddx54Q8K4L0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx54Q8K4L0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx54Q8K4L0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ddx54Q8K4L0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ddx54Q8K4L0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ddx54Q8K4L0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC21.73■■□□□ 1.07
Ddx54Q8K4L0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx54Q8K4L0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC21.73■■□□□ 1.07
Ddx54Q8K4L0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx54Q8K4L0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx54Q8K4L0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC21.73■■□□□ 1.07
Ddx54Q8K4L0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx54Q8K4L0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx54Q8K4L0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx54Q8K4L0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Ddx54Q8K4L0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx54Q8K4L0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.73■■□□□ 1.07
Ddx54Q8K4L0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ddx54Q8K4L0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ddx54Q8K4L0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Gm9889-202ENSMUST00000206983 1577 ntBASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ddx54Q8K4L0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx54Q8K4L0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx54Q8K4L0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx54Q8K4L0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx54Q8K4L0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx54Q8K4L0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC21.71■■□□□ 1.07
Ddx54Q8K4L0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC21.71■■□□□ 1.07
Ddx54Q8K4L0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx54Q8K4L0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx54Q8K4L0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ddx54Q8K4L0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx54Q8K4L0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx54Q8K4L0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx54Q8K4L0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Ddx54Q8K4L0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Ddx54Q8K4L0 Gm43438-201ENSMUST00000198133 379 ntBASIC21.7■■□□□ 1.06
Ddx54Q8K4L0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx54Q8K4L0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx54Q8K4L0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ddx54Q8K4L0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ddx54Q8K4L0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC21.68■■□□□ 1.06
Ddx54Q8K4L0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC21.68■■□□□ 1.06
Ddx54Q8K4L0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC21.68■■□□□ 1.06
Ddx54Q8K4L0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC21.68■■□□□ 1.06
Ddx54Q8K4L0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC21.68■■□□□ 1.06
Ddx54Q8K4L0 Gm7229-201ENSMUST00000214719 1007 ntBASIC21.68■■□□□ 1.06
Ddx54Q8K4L0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Ddx54Q8K4L0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx54Q8K4L0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx54Q8K4L0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ddx54Q8K4L0 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.68■■□□□ 1.06
Ddx54Q8K4L0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms