Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cchcr1Q8K2I2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cchcr1Q8K2I2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Cchcr1Q8K2I2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cchcr1Q8K2I2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Cchcr1Q8K2I2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cchcr1Q8K2I2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cchcr1Q8K2I2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cchcr1Q8K2I2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.66■□□□□ 0.74
Cchcr1Q8K2I2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cchcr1Q8K2I2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Cchcr1Q8K2I2 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.66■□□□□ 0.74
Cchcr1Q8K2I2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cchcr1Q8K2I2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cchcr1Q8K2I2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cchcr1Q8K2I2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cchcr1Q8K2I2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cchcr1Q8K2I2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cchcr1Q8K2I2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cchcr1Q8K2I2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cchcr1Q8K2I2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cchcr1Q8K2I2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms