Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4rl1Q8K0S5 Gm15590-201ENSMUST00000078419 552 ntBASIC16.77■□□□□ 0.28
Rtn4rl1Q8K0S5 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4rl1Q8K0S5 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.77■□□□□ 0.28
Rtn4rl1Q8K0S5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rtn4rl1Q8K0S5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Rtn4rl1Q8K0S5 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rtn4rl1Q8K0S5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rtn4rl1Q8K0S5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.76■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4rl1Q8K0S5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm15173-201ENSMUST00000122049 433 ntBASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn4rl1Q8K0S5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm15467-201ENSMUST00000120582 445 ntBASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm11780-201ENSMUST00000136880 516 ntBASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rtn4rl1Q8K0S5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn4rl1Q8K0S5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn4rl1Q8K0S5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn4rl1Q8K0S5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn4rl1Q8K0S5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn4rl1Q8K0S5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rtn4rl1Q8K0S5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rtn4rl1Q8K0S5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rtn4rl1Q8K0S5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Rtn4rl1Q8K0S5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
Rtn4rl1Q8K0S5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.72■□□□□ 0.27
Rtn4rl1Q8K0S5 Gm6089-201ENSMUST00000197666 938 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms