Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Rab43Q8CG50 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rab43Q8CG50 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.18■□□□□ 0.18
Rab43Q8CG50 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.18■□□□□ 0.18
Rab43Q8CG50 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rab43Q8CG50 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rab43Q8CG50 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.17■□□□□ 0.18
Rab43Q8CG50 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Gm18733-201ENSMUST00000173950 856 ntBASIC16.17■□□□□ 0.18
Rab43Q8CG50 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rab43Q8CG50 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.16■□□□□ 0.18
Rab43Q8CG50 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Gm44430-201ENSMUST00000203376 995 ntBASIC16.16■□□□□ 0.18
Rab43Q8CG50 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.16■□□□□ 0.18
Rab43Q8CG50 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.16■□□□□ 0.18
Rab43Q8CG50 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rab43Q8CG50 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab43Q8CG50 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Rab43Q8CG50 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab43Q8CG50 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab43Q8CG50 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rab43Q8CG50 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rab43Q8CG50 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms