Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Smc5Q8CG46 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Smc5Q8CG46 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.58■□□□□ 0.89
Smc5Q8CG46 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc5Q8CG46 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc5Q8CG46 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smc5Q8CG46 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc5Q8CG46 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smc5Q8CG46 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc5Q8CG46 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc5Q8CG46 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Smc5Q8CG46 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.58■□□□□ 0.89
Smc5Q8CG46 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.58■□□□□ 0.89
Smc5Q8CG46 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc5Q8CG46 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smc5Q8CG46 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smc5Q8CG46 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc5Q8CG46 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc5Q8CG46 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Smc5Q8CG46 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc5Q8CG46 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc5Q8CG46 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc5Q8CG46 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc5Q8CG46 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.57■□□□□ 0.88
Smc5Q8CG46 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Smc5Q8CG46 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Smc5Q8CG46 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
Smc5Q8CG46 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc5Q8CG46 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc5Q8CG46 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC20.57■□□□□ 0.88
Smc5Q8CG46 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smc5Q8CG46 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc5Q8CG46 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc5Q8CG46 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smc5Q8CG46 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smc5Q8CG46 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC20.56■□□□□ 0.88
Smc5Q8CG46 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC20.56■□□□□ 0.88
Smc5Q8CG46 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc5Q8CG46 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc5Q8CG46 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Smc5Q8CG46 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.56■□□□□ 0.88
Smc5Q8CG46 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smc5Q8CG46 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc5Q8CG46 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc5Q8CG46 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Smc5Q8CG46 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smc5Q8CG46 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.56■□□□□ 0.88
Smc5Q8CG46 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smc5Q8CG46 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smc5Q8CG46 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Gm13186-201ENSMUST00000118031 316 ntBASIC20.55■□□□□ 0.88
Smc5Q8CG46 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.55■□□□□ 0.88
Smc5Q8CG46 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.55■□□□□ 0.88
Smc5Q8CG46 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smc5Q8CG46 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Smc5Q8CG46 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Actl10-202ENSMUST00000226583 1501 ntBASIC20.54■□□□□ 0.88
Smc5Q8CG46 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Gm10653-202ENSMUST00000139570 835 ntBASIC20.54■□□□□ 0.88
Smc5Q8CG46 Timm23-208ENSMUST00000226683 750 ntBASIC20.54■□□□□ 0.88
Smc5Q8CG46 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smc5Q8CG46 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Smc5Q8CG46 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc5Q8CG46 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smc5Q8CG46 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms