Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nup88Q8CEC0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Gm7638-201ENSMUST00000121348 967 ntBASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nup88Q8CEC0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Gm22697-201ENSMUST00000175194 63 ntBASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Gm33142-201ENSMUST00000193913 867 ntBASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nup88Q8CEC0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nup88Q8CEC0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.58■□□□□ 0.73
Nup88Q8CEC0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup88Q8CEC0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup88Q8CEC0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup88Q8CEC0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup88Q8CEC0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup88Q8CEC0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup88Q8CEC0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nup88Q8CEC0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nup88Q8CEC0 Gm7791-201ENSMUST00000219066 539 ntBASIC19.58■□□□□ 0.72
Nup88Q8CEC0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nup88Q8CEC0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nup88Q8CEC0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nup88Q8CEC0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nup88Q8CEC0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Nup88Q8CEC0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nup88Q8CEC0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nup88Q8CEC0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.58■□□□□ 0.72
Nup88Q8CEC0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nup88Q8CEC0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms