Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Gm17661-201ENSMUST00000170317 270 ntBASIC17.52■□□□□ 0.4
Fam228aQ8CDW1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.52■□□□□ 0.4
Fam228aQ8CDW1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam228aQ8CDW1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Fam228aQ8CDW1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Fam228aQ8CDW1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Fam228aQ8CDW1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Fam228aQ8CDW1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fam228aQ8CDW1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Gm37179-201ENSMUST00000194862 823 ntBASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Gm37025-201ENSMUST00000195159 829 ntBASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Fam228aQ8CDW1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Fam228aQ8CDW1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Fam228aQ8CDW1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Fam228aQ8CDW1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fam228aQ8CDW1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Fam228aQ8CDW1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.47■□□□□ 0.39
Fam228aQ8CDW1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Fam228aQ8CDW1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms