Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cpne1Q8C166 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.55■□□□□ 0.08
Cpne1Q8C166 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Gm13836-201ENSMUST00000121159 501 ntBASIC15.55■□□□□ 0.08
Cpne1Q8C166 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cpne1Q8C166 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cpne1Q8C166 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.54■□□□□ 0.08
Cpne1Q8C166 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cpne1Q8C166 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.54■□□□□ 0.08
Cpne1Q8C166 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Actl10-202ENSMUST00000226583 1501 ntBASIC15.53■□□□□ 0.08
Cpne1Q8C166 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.53■□□□□ 0.08
Cpne1Q8C166 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.53■□□□□ 0.08
Cpne1Q8C166 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.53■□□□□ 0.08
Cpne1Q8C166 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cpne1Q8C166 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.52■□□□□ 0.08
Cpne1Q8C166 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne1Q8C166 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne1Q8C166 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne1Q8C166 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne1Q8C166 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne1Q8C166 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Cpne1Q8C166 Gm22697-201ENSMUST00000175194 63 ntBASIC15.52■□□□□ 0.08
Cpne1Q8C166 Mir1668-201ENSMUST00000184114 107 ntBASIC15.52■□□□□ 0.08
Cpne1Q8C166 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.52■□□□□ 0.08
Cpne1Q8C166 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne1Q8C166 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cpne1Q8C166 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cpne1Q8C166 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpne1Q8C166 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpne1Q8C166 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpne1Q8C166 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cpne1Q8C166 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.52■□□□□ 0.07
Cpne1Q8C166 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Cpne1Q8C166 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms