Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3rf3Q8C120 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3rf3Q8C120 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.33■□□□□ 0.37
Sh3rf3Q8C120 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3rf3Q8C120 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Sh3rf3Q8C120 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Phf7-203ENSMUST00000226565 1971 ntBASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3rf3Q8C120 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3rf3Q8C120 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Gm16061-201ENSMUST00000122167 857 ntBASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3rf3Q8C120 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3rf3Q8C120 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms