Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf2Q8BZT2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf2Q8BZT2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.84■□□□□ 0.29
Sh3rf2Q8BZT2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.84■□□□□ 0.29
Sh3rf2Q8BZT2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.84■□□□□ 0.29
Sh3rf2Q8BZT2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf2Q8BZT2 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.84■□□□□ 0.29
Sh3rf2Q8BZT2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf2Q8BZT2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf2Q8BZT2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sh3rf2Q8BZT2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf2Q8BZT2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3rf2Q8BZT2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sh3rf2Q8BZT2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sh3rf2Q8BZT2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sh3rf2Q8BZT2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Gm10052-201ENSMUST00000168019 960 ntBASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Gm7729-201ENSMUST00000050143 801 ntBASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sh3rf2Q8BZT2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3rf2Q8BZT2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sh3rf2Q8BZT2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Gm27459-201ENSMUST00000184860 107 ntBASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sh3rf2Q8BZT2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sh3rf2Q8BZT2 Gm43347-201ENSMUST00000200226 580 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms