Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Scfd1Q8BRF7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scfd1Q8BRF7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scfd1Q8BRF7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scfd1Q8BRF7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scfd1Q8BRF7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Scfd1Q8BRF7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Scfd1Q8BRF7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scfd1Q8BRF7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scfd1Q8BRF7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scfd1Q8BRF7 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.98■□□□□ 0.63
Scfd1Q8BRF7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scfd1Q8BRF7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.98■□□□□ 0.63
Scfd1Q8BRF7 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.98■□□□□ 0.63
Scfd1Q8BRF7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scfd1Q8BRF7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scfd1Q8BRF7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Scfd1Q8BRF7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Scfd1Q8BRF7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Scfd1Q8BRF7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scfd1Q8BRF7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Gm28659-201ENSMUST00000188013 759 ntBASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Gm44454-201ENSMUST00000198541 138 ntBASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scfd1Q8BRF7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Gm12644-201ENSMUST00000119935 606 ntBASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scfd1Q8BRF7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scfd1Q8BRF7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Scfd1Q8BRF7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scfd1Q8BRF7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scfd1Q8BRF7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scfd1Q8BRF7 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scfd1Q8BRF7 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.94■□□□□ 0.62
Scfd1Q8BRF7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scfd1Q8BRF7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scfd1Q8BRF7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scfd1Q8BRF7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scfd1Q8BRF7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms