Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Suds3Q8BR65 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Suds3Q8BR65 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Suds3Q8BR65 Gm6433-201ENSMUST00000118634 875 ntBASIC17.09■□□□□ 0.33
Suds3Q8BR65 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Suds3Q8BR65 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Suds3Q8BR65 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.09■□□□□ 0.33
Suds3Q8BR65 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Suds3Q8BR65 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Suds3Q8BR65 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Suds3Q8BR65 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Suds3Q8BR65 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Suds3Q8BR65 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Suds3Q8BR65 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Suds3Q8BR65 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Suds3Q8BR65 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Suds3Q8BR65 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Suds3Q8BR65 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.08■□□□□ 0.33
Suds3Q8BR65 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Suds3Q8BR65 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.08■□□□□ 0.32
Suds3Q8BR65 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Suds3Q8BR65 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Suds3Q8BR65 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.08■□□□□ 0.32
Suds3Q8BR65 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Suds3Q8BR65 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Suds3Q8BR65 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Suds3Q8BR65 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.08■□□□□ 0.32
Suds3Q8BR65 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Suds3Q8BR65 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Suds3Q8BR65 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.08■□□□□ 0.32
Suds3Q8BR65 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Suds3Q8BR65 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Suds3Q8BR65 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Suds3Q8BR65 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Suds3Q8BR65 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Gm13559-201ENSMUST00000120476 863 ntBASIC17.07■□□□□ 0.32
Suds3Q8BR65 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Gm38027-201ENSMUST00000192315 235 ntBASIC17.07■□□□□ 0.32
Suds3Q8BR65 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.07■□□□□ 0.32
Suds3Q8BR65 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.07■□□□□ 0.32
Suds3Q8BR65 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.07■□□□□ 0.32
Suds3Q8BR65 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.07■□□□□ 0.32
Suds3Q8BR65 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Suds3Q8BR65 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.06■□□□□ 0.32
Suds3Q8BR65 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Suds3Q8BR65 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms