Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col16a1Q8BLX7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col16a1Q8BLX7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Col16a1Q8BLX7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Col16a1Q8BLX7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col16a1Q8BLX7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Col16a1Q8BLX7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Col16a1Q8BLX7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Col16a1Q8BLX7 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC21.78■■□□□ 1.08
Col16a1Q8BLX7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col16a1Q8BLX7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col16a1Q8BLX7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC21.78■■□□□ 1.08
Col16a1Q8BLX7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col16a1Q8BLX7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col16a1Q8BLX7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Col16a1Q8BLX7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col16a1Q8BLX7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col16a1Q8BLX7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC21.78■■□□□ 1.08
Col16a1Q8BLX7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC21.78■■□□□ 1.08
Col16a1Q8BLX7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col16a1Q8BLX7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col16a1Q8BLX7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC21.77■■□□□ 1.08
Col16a1Q8BLX7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col16a1Q8BLX7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC21.77■■□□□ 1.08
Col16a1Q8BLX7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col16a1Q8BLX7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col16a1Q8BLX7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Col16a1Q8BLX7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Col16a1Q8BLX7 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.77■■□□□ 1.07
Col16a1Q8BLX7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col16a1Q8BLX7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Col16a1Q8BLX7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col16a1Q8BLX7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col16a1Q8BLX7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC21.75■■□□□ 1.07
Col16a1Q8BLX7 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col16a1Q8BLX7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col16a1Q8BLX7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col16a1Q8BLX7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col16a1Q8BLX7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col16a1Q8BLX7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col16a1Q8BLX7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col16a1Q8BLX7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col16a1Q8BLX7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Col16a1Q8BLX7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC21.74■■□□□ 1.07
Col16a1Q8BLX7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Col16a1Q8BLX7 Gm6858-201ENSMUST00000208582 1468 ntBASIC21.74■■□□□ 1.07
Col16a1Q8BLX7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col16a1Q8BLX7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col16a1Q8BLX7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col16a1Q8BLX7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col16a1Q8BLX7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col16a1Q8BLX7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col16a1Q8BLX7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col16a1Q8BLX7 Gm37500-201ENSMUST00000192059 1443 ntBASIC21.73■■□□□ 1.07
Col16a1Q8BLX7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC21.73■■□□□ 1.07
Col16a1Q8BLX7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col16a1Q8BLX7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col16a1Q8BLX7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Col16a1Q8BLX7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
Col16a1Q8BLX7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col16a1Q8BLX7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC21.73■■□□□ 1.07
Col16a1Q8BLX7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col16a1Q8BLX7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Col16a1Q8BLX7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col16a1Q8BLX7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Gm7222-201ENSMUST00000117512 906 ntBASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Gm10576-201ENSMUST00000191927 825 ntBASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 AC151286.1-201ENSMUST00000198489 145 ntBASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Gm3928-201ENSMUST00000121141 1307 ntBASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Col16a1Q8BLX7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms