Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Gm5643-201ENSMUST00000117081 966 ntBASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdhr3Q8BL00 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Gm15378-201ENSMUST00000121894 207 ntBASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Gm10698-201ENSMUST00000182663 604 ntBASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdhr3Q8BL00 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.52□□□□□ -0.08
Cdhr3Q8BL00 Gm12085-201ENSMUST00000119263 940 ntBASIC14.52□□□□□ -0.09
Cdhr3Q8BL00 Gm7638-201ENSMUST00000121348 967 ntBASIC14.52□□□□□ -0.09
Cdhr3Q8BL00 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdhr3Q8BL00 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdhr3Q8BL00 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdhr3Q8BL00 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdhr3Q8BL00 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdhr3Q8BL00 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdhr3Q8BL00 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdhr3Q8BL00 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.51□□□□□ -0.09
Cdhr3Q8BL00 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms