Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp1Q8BJQ2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp1Q8BJQ2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Gm27459-201ENSMUST00000184860 107 ntBASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Gm29707-201ENSMUST00000196325 491 ntBASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp1Q8BJQ2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Usp1Q8BJQ2 Mir8098-201ENSMUST00000184011 137 ntBASIC17.61■□□□□ 0.41
Usp1Q8BJQ2 Gm44450-201ENSMUST00000199528 114 ntBASIC17.61■□□□□ 0.41
Usp1Q8BJQ2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp1Q8BJQ2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp1Q8BJQ2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp1Q8BJQ2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp1Q8BJQ2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp1Q8BJQ2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp1Q8BJQ2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Usp1Q8BJQ2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp1Q8BJQ2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp1Q8BJQ2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Gm15372-201ENSMUST00000120729 834 ntBASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Gm43347-201ENSMUST00000200226 580 ntBASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp1Q8BJQ2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.59■□□□□ 0.41
Usp1Q8BJQ2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp1Q8BJQ2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms