Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2bQ8BJF9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2bQ8BJF9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2bQ8BJF9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp2bQ8BJF9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Chmp2bQ8BJF9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Gm5643-201ENSMUST00000117081 966 ntBASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp2bQ8BJF9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Gm15378-201ENSMUST00000121894 207 ntBASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.04■□□□□ 0.32
Chmp2bQ8BJF9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Gm12085-201ENSMUST00000119263 940 ntBASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Gm27000-201ENSMUST00000182943 842 ntBASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp2bQ8BJF9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2bQ8BJF9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2bQ8BJF9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2bQ8BJF9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2bQ8BJF9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2bQ8BJF9 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2bQ8BJF9 Gm15039-201ENSMUST00000118914 875 ntBASIC17.02■□□□□ 0.32
Chmp2bQ8BJF9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2bQ8BJF9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2bQ8BJF9 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.02■□□□□ 0.32
Chmp2bQ8BJF9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Chmp2bQ8BJF9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2bQ8BJF9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp2bQ8BJF9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Chmp2bQ8BJF9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp2bQ8BJF9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp2bQ8BJF9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp2bQ8BJF9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.02■□□□□ 0.31
Chmp2bQ8BJF9 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp2bQ8BJF9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp2bQ8BJF9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp2bQ8BJF9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.31
Chmp2bQ8BJF9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms