Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rnf38Q8BI21 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Gm7638-201ENSMUST00000121348 967 ntBASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rnf38Q8BI21 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rnf38Q8BI21 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rnf38Q8BI21 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rnf38Q8BI21 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf38Q8BI21 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf38Q8BI21 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf38Q8BI21 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf38Q8BI21 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rnf38Q8BI21 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf38Q8BI21 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Rnf38Q8BI21 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.03■□□□□ 0.16
Rnf38Q8BI21 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf38Q8BI21 Gm10812-201ENSMUST00000099864 546 ntBASIC16.03■□□□□ 0.16
Rnf38Q8BI21 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf38Q8BI21 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rnf38Q8BI21 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf38Q8BI21 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf38Q8BI21 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms