Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Trim50Q810I2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim50Q810I2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim50Q810I2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trim50Q810I2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim50Q810I2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim50Q810I2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.21■□□□□ 0.19
Trim50Q810I2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim50Q810I2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim50Q810I2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim50Q810I2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
Trim50Q810I2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trim50Q810I2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim50Q810I2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim50Q810I2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trim50Q810I2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trim50Q810I2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim50Q810I2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim50Q810I2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim50Q810I2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trim50Q810I2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Trim50Q810I2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Trim50Q810I2 Gm7213-201ENSMUST00000215977 950 ntBASIC16.2■□□□□ 0.18
Trim50Q810I2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trim50Q810I2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim50Q810I2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trim50Q810I2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim50Q810I2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim50Q810I2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim50Q810I2 Actl10-202ENSMUST00000226583 1501 ntBASIC16.19■□□□□ 0.18
Trim50Q810I2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim50Q810I2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim50Q810I2 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.19■□□□□ 0.18
Trim50Q810I2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim50Q810I2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim50Q810I2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim50Q810I2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim50Q810I2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim50Q810I2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trim50Q810I2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim50Q810I2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim50Q810I2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim50Q810I2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim50Q810I2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim50Q810I2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim50Q810I2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim50Q810I2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim50Q810I2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim50Q810I2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim50Q810I2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.18■□□□□ 0.18
Trim50Q810I2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim50Q810I2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim50Q810I2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim50Q810I2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim50Q810I2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim50Q810I2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim50Q810I2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim50Q810I2 Gm13186-201ENSMUST00000118031 316 ntBASIC16.18■□□□□ 0.18
Trim50Q810I2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.18■□□□□ 0.18
Trim50Q810I2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim50Q810I2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim50Q810I2 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.18■□□□□ 0.18
Trim50Q810I2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.18■□□□□ 0.18
Trim50Q810I2 Gm10566-201ENSMUST00000086739 996 ntBASIC16.18■□□□□ 0.18
Trim50Q810I2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim50Q810I2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim50Q810I2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.18■□□□□ 0.18
Trim50Q810I2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trim50Q810I2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim50Q810I2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim50Q810I2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim50Q810I2 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.17■□□□□ 0.18
Trim50Q810I2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim50Q810I2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim50Q810I2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim50Q810I2 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.17■□□□□ 0.18
Trim50Q810I2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.17■□□□□ 0.18
Trim50Q810I2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim50Q810I2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trim50Q810I2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.17■□□□□ 0.18
Trim50Q810I2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trim50Q810I2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms