Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Lrrtm4Q80XG9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Lrrtm4Q80XG9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lrrtm4Q80XG9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lrrtm4Q80XG9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Gm27704-201ENSMUST00000185094 107 ntBASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Gm45328-201ENSMUST00000210942 917 ntBASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lrrtm4Q80XG9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lrrtm4Q80XG9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lrrtm4Q80XG9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lrrtm4Q80XG9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms